Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRCRPPSRNRSAHTARNTRPCSLKSRRFTVRFHQTLAAAANSYADAEAAIASTRQNQLAVPAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPPPSMLT-PPIRCRS---VR---RALQAVFTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELA-TTGNAVTVFGWSQSAIIASLEMQRFTAMGGAAPSASDLNFVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVPPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAATVGLGTIDSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRRPPTTVYRPRQ |
| 3QPD Chain:A ((36-199)) | ---------------------------------------------------------------------------PCKPITFIFARASTEPGLLGISTGPAVCNRLKLARSGDVACQGVGPRYTADLPSN----ALPEGTSQ-AAIAEAQGLFEQAVSKCPDTQIVAGGYSQGTAVMNGAIKRLSADV----QDKIKGVVLFGYTRNAQER--GQ-----IA--N------FP---KDKVKVYCAVGDLVCLGTLI-------------VAPPHFSYLS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QPD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50638 for 1303 contacts (-38.9/contact) +
2D Compatibility (PS) -16513 + (NN) -6800 + (LL) 21260
1D Compatibility (HY) 5600 + (ID) 500
Total energy: -47591.0 ( -36.52 by residue)
QMean score : 0.219
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