Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQGPRERMVVSAALLIRERGAHATAISDVLQHSGAPRGSAYHYFPGGRTQLLCEAVDYAGEHVAAMINEAEGGLEL-LDALIDKYRQQLLSTDFRAGCPIAAVSVEAGDEQDRERMAPVIARAAAVFDRWSDLTAQRFIADGIPPDRAHELAVLATSTLEGAILLARVRRDLTPLDLVHRQLRNLLLAELPERSR
3ON4 Chain:A ((8-180))
ISNTKERILAVAEALIQKDGYNAFSFKDIATAINIKTASIHYHFP-SKEDLGVAVISWHTDKIAAVLSDISNNSSLSAKEKIQKFFDAILTLTYNSENKMCLGGMFASDFQSLP--VSIQNQAKKFFELIIEWLKGVLETNGYDNESSLSLAKQIISLVEGGLLLARLYGDETFLE-------------------
General information:
TITO was launched using:
RESULT:
Template:
3ON4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57498 for 1258 contacts (-45.7/contact) +
2D Compatibility (PS) -19088 + (NN) -12441 + (LL) 2052
1D Compatibility (HY) -8400 + (ID) 1800
Total energy: -97175.0 ( -77.25 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_3ON4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ON4-query.scw
PDB file :
Tito_Scwrl_3ON4.pdb
: