Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSPRRWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARNDGIANVDNIDDAALSAAGYLCWRGKDL-------ATPRGWITALRAYNNSV----------------IYARAVRDWATAYAAGHPL |
| 1GBS Chain:A ((54-182)) | ----------------------------------------------------------------------------------------KVGEKLCVEPAVIAGIISRESHAGKVLKN-----------------------------------GWGDRGNGFGLMQVDKRSHKPQG----------TWNGEVHITQGTTILTDFIKRIQKKFPSWTKDQQLKGGISAYNAGAGNVRSYARMDIGTTHDDYANDVVARAQYYKQ---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GBS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33443 for 758 contacts (-44.1/contact) +
2D Compatibility (PS) -10887 + (NN) -1014 + (LL) 6656
1D Compatibility (HY) 0 + (ID) 1200
Total energy: -39888.0 ( -52.62 by residue)
QMean score : 0.244
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