Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAQKPVADALTLELEPVVEANMTRHLDT-EDIWFAHDYVPFDQGENFAFLGGRDWDPSQSTLPRTITDACEILLILKDNLAGHHRELVEHFIL-------EDWWGRWLGRWTAEEHLHAIALREYLVVTREVDPVANEDVRVQHVMKGYRAE-KYTQVETLVYMAFYERCGAVFCRNLAAQ---IEEPILAGLIDRIARDEVRHEEFFANLVTHCLDYTRDETIAAIAARAAD-LDVLGADIEAY------RDKLQNVADAGIFGKPQLRQLISDRITAWGLAGEPSLKQFVTG |
2UW1 Chain:A ((12-292)) | -------LEIFKSLDDWARNNVLIHLKSVEKSWQPQDYLPDPVSDGFEEQ-VRELRERAKEIPDDYFVVLVGDMITEEALPTYMSMLNRCDGIKDETGAEPSAWAMWTRAWTAEENRHGDLLNKYLYLSGRVDMRKIEKTIQYLIGSGMDIKSENSPYLGFIYTSFQERATFISHANTAKLAQHYGDKKLAHICGSIASDEKRHATAYTKIVEKLAEIDPDTTVIAFADMMRKKITMPAHLMYDGSDELLFKHFTAVAQRLGVYSALDYCDILEFLVDKWNVERLTGLS----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2UW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136809 for 2017 contacts (-67.8/contact) +
2D Compatibility (PS) -28088 + (NN) -11506 + (LL) 884
1D Compatibility (HY) -9200 + (ID) 2600
Total energy: -187319.0 ( -92.87 by residue)
QMean score : 0.506
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