Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNAIANLAATPGADLGECLADLAVDALIDEAELSPKPALVDRRGNGAHADLHLGLMQASALSLW--PCFKEMADAAQRHGRIDARLRGVLGQLGRDGEAA---MLRTTEGVNTHRGAIWALGLLVAAAALEPRRTQAGEVAARAGRIALLDDPAAAIGDSHGERVRRRYGVGGAREEARLCFPRAVR-HGLPQLWRSREGGAGEQNAR--------LDALLAIMSVLD-----DTCVLHRAGRVGLAAMQDGARAVLAAGGSA-SLAGRRRLCELDRRLLALNASPGGAADLLAACLFLDRLPAVSGGWAGSL------------------------------------ |
2W2K Chain:A ((2-346)) | PRPRVLLLGDPARHLDDLWSDFQQKFEVIPANLTTHDGFKQALREKRYGDFEAIIKLAVENGTESYPWNADLISHLPSSLKVFAAAGAGFDWLDLDALNERGVAFANSRGAGDTATSDLALYLILSVFR----LASYSERAARTGDPETFNRVHLEIGKSAHNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFEPQVSKELIEMKHVTLTTHIGGVAIETFHEFERLTMTNIDRFLLQGKPLLTPAGKVFAPSS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W2K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62954 for 2076 contacts (-30.3/contact) +
2D Compatibility (PS) -30997 + (NN) -8550 + (LL) 240
1D Compatibility (HY) -2400 + (ID) 2200
Total energy: -106861.0 ( -51.47 by residue)
QMean score : 0.175
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