Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTIDYNSYRTTTPYGKRVRFLVLHYTALDFAASVKALTTGAASAHYLIPAPHDPSYKAAGFKGQRIFNLVAEEDRAWHAGVSGWARRDNLNDTSIGIEIVNLARDDDGVFTFPDYERSQINALKQLAKNILQRYPDMTPKNVVGHSDIAVGRKSDPGPKLPWKELYEAGIGAWYDDATRDRYREGFERDGLPPRADLLEAFRLYGYALPATVDDAYFASLLRAFQMHFRPENYDGALDVETAAILYALNEKYPA
4BXD Chain:B ((1-255))
MLTIDYNSYRTTTPYGKRVRFLVLHYTALDFAASVKALTTGAASAHYLIPAPHDPSYKAAGFKGQRIFNLVAEEDRAWHAGVSGWARRDNLNDTSIGIEIVNLARDDDGVFTFPDYERSQINALKQLAKNILQRYPDMTPKNVVGHSDIAVGRKSDPGPKLPWKELYEAGIGAWYDDATRDRYREGFERDGLPPRADLLEAFRLYGYALPATVDDAYFASLLRAFQMHFRPENYDGALDVETAAILYALNEKYPA
General information:
TITO was launched using:
RESULT:
Template:
4BXD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109345 for 2065 contacts (-53.0/contact) +
2D Compatibility (PS) -28694 + (NN) -26353 + (LL) 0
1D Compatibility (HY) -32800 + (ID) 12750
Total energy: -209942.0 ( -101.67 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_4BXD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BXD-query.scw
PDB file :
Tito_Scwrl_4BXD.pdb
: