Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKPETTAAPNFLRQIVQADLDAGKHAKIVTRFPPEPNGYLHIGHAKSICLNFGLAQEFAGDCHLRFDDTNPAKEDQEYIDAIEADIKWLGFQWSGEVCYASNYFDQLHAWAVELIKAGKAFVCDLGPEEMREYRGTLTEPGRNSPYRDRSVEENLDLFARMKAGEFPDGARSLRAKIDMGSPNMNLRDPILYRIRHAHHHQTGDKWCIYPSYDFTHGQSDAIEGITHSICTLEFEDHRPLYEWFLANLPVPAQPRQYEFSRLNLNYTVTSKRKLKQLVDEGHVSGWDDPRMSTLSGYRRRGYTPESIRNFCEMIGVNRASGVVDIGMLEFSIRDHLDATAPRAMCVLKPLKVVITNYPEGQVENLELPRHPK-EDMGVRVLPFGRELFIDAGDFEEVPPAGYKRLIPGGEVRLRGS-YVIRADEAIKDADGNIVELRCSYDPDTLGKNPEGRKVKGVIHWVPAEGSVECEVRLYDRLFRSANPEK-AEEGGSFLDNINADSLQVLAGCRAEPSLGQANPEDRFQFEREGYFVADLKDSRPGKPVFNRTVTLRDSWGQG |
4R3Z Chain:C ((287-795)) | ---------------------------QVRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFLRFDDTNPEKEEAKFFTAICDMVAWLGYT-PYKVTYASDYFDQLYAWAVELIRRGLAYVCHQRGEELK-------LP---SPWRDRPMEESLLLFEAMRKGKFSEGEATLRMKLVM--GKM---DPVAYRVKYTPHHRTGDKWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYC-PVQWEYGRLNLHYAVVSKRKILQLVATGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVGVTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLESLRVIITNFPAAKSLDIQVPNFPADE--GFHQVPFAPIVFIERTDFKEEPEPGFKRLAWGQPVGLRHTGYVIELQHVVKGPSGCVESLEV-----TCRRADAGEKP--FIHWV--SQPLMCEVRLYERLFQH---EDPTEVPGGFLSDLNLASLHVVDAALVDCSVALA-PFDKFQFERLGYFSVD-PDSHQGKLVFNRTVTLKED---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R3Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187525 for 3917 contacts (-47.9/contact) +
2D Compatibility (PS) -52260 + (NN) -19627 + (LL) 2092
1D Compatibility (HY) -48800 + (ID) 12400
Total energy: -318520.0 ( -81.32 by residue)
QMean score : 0.400
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