Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQRLYRKRIVLGVGGGIAAYKSAELVRRLRDQGAEVRVVMTQGGREFITPLTLQALSGHPVHTDLLDPAAEAAMGHIELARWADLVLIAPATADLMARLVQGVANDLLTTLVLATDAQIALAPAMNQAMWRDTATQANAELLRQRGFHLFGPAAGSQACGDVGLGRMLEAEELAQRAADCFQRQALTGVHVLITAGPTQENIDPVRYITNHSSGKMGFALAEAAVEAGARVTLVTG-PVHLPTPDRVQRVDVVSARDMLAACEAAMP-CDLLIASAAVADYRPEVVAAHKLKK---DPTSGEGLLLQLVRNPDILA-TLAQREDRPFS-----VGFAAET----ENLLDYAARKLKDKNLDLIVANDVANPSIGFNSDENAITVIDRDLHPSTFAQTSKGKIARQLVAFIADRLNQQ |
| 4QJI Chain:B ((10-235)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAGVKALVTAGGTREPLDPVRFIGNRSSGKQGYAVARVLAQRGADVTLIAGNTAGLIDPAGVEMVHIGSATQLRDAVSKHAPDANVLVMAAAVADFRPAHVAAAKIKKGASEPSS-----IDLVRNDDVLAGAVRARADGQLPNMRAIVGFAAETGDANGDVLFHARAKLERKGCDLLVVN--------------DGWLLSADGTESALEHGSKTLMATRIVDSIAAFLKSQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128649 for 1557 contacts (-82.6/contact) +
2D Compatibility (PS) -22224 + (NN) -13187 + (LL) 15644
1D Compatibility (HY) -14800 + (ID) 4300
Total energy: -167516.0 ( -107.59 by residue)
QMean score : 0.582
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