Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRDGVQVLSILGRDYSIRVPAGEERALADAAALLQAEVDANKRKFPYVTSNELVVLSALNLCARQLGANDGESPRLRAVEQRLEALVERIAGASG
3N0R Chain:A ((145-207))
------------------------ERLIGDA----QAEIDAELATEVLIIEDEPVIAADIEALVRELGHDVTDIAATRG--EALEAVTRRTPG---
General information:
TITO was launched using:
RESULT:
Template:
3N0R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 13105 for 350 contacts (37.4/contact) +
2D Compatibility (PS) -7299 + (NN) -6744 + (LL) 2292
1D Compatibility (HY) -1600 + (ID) 1000
Total energy: -1246.0 ( -3.56 by residue)
QMean score : 0.300
(partial model without unconserved sides chains):
PDB file :
Tito_3N0R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N0R-query.scw
PDB file :
Tito_Scwrl_3N0R.pdb
: