Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPVNRNV
2H5K Chain:A ((5-100))
--------------------------------------------------------PHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIE-----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2H5K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25129 for 509 contacts (-49.4/contact) +
2D Compatibility (PS) -10725 + (NN) -8519 + (LL) 6184
1D Compatibility (HY) -13200 + (ID) 4800
Total energy: -56189.0 ( -110.39 by residue)
QMean score : 0.250
(partial model without unconserved sides chains):
PDB file :
Tito_2H5K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H5K-query.scw
PDB file :
Tito_Scwrl_2H5K.pdb
: