Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLSDGEWQLVLNVWGKVEADIPGHGQEVLIRLFKGHPETLEKFDKFKHLKSEDEMKASEDLKKHGATVLTALGGILKKKGHHEAEIKPLAQSHATKHKIPVKYLEFISECIIQVLQSKHPGDFGADAQGAMNKALELFRKDMASNYKELGFQG
1MNI Chain:A ((1-153))
-GLSDGEWQLVLNVWGKVEADVAGHGQEVLIRLFKGHPETLEKFDKFKHLKSEDEMKASEDLKKVGNTHLTALGGILKKKGHHEAELTPLAQSHATKHKIPVKYLEFISEAIIQVLQSKHPGDFGADAQGAMSKALELFRNDMAAKYKELGFQG
General information:
TITO was launched using:
RESULT:
Template:
1MNI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61130 for 1122 contacts (-54.5/contact) +
2D Compatibility (PS) -16352 + (NN) -10057 + (LL) 208
1D Compatibility (HY) -17200 + (ID) 7050
Total energy: -111581.0 ( -99.45 by residue)
QMean score : 0.641
(partial model without unconserved sides chains):
PDB file :
Tito_1MNI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MNI-query.scw
PDB file :
Tito_Scwrl_1MNI.pdb
: