Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKNTEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTHGTAVCTRTYEKEA
3P6E Chain:A ((8-138))
MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKNTEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVMKGVTSTRVYER--
General information:
TITO was launched using:
RESULT:
Template:
3P6E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34776 for 936 contacts (-37.2/contact) +
2D Compatibility (PS) -14666 + (NN) -3593 + (LL) 248
1D Compatibility (HY) -12400 + (ID) 4250
Total energy: -69437.0 ( -74.18 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_3P6E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P6E-query.scw
PDB file :
Tito_Scwrl_3P6E.pdb
: