Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLLSALTLETWVLLAVVLVLLYGFGTRTHGLFKKQGIPGPKPLPFFGTVLNYYMGLWKFDVECHKKYGKIWGLFDGQMPLFAITDTEMIKNVLVKECFSVFTNRRDFGPVGIMGKAVSVAKDEEWKRYRALLSPTFTSGRLKEMFPIIEQYGDILVK---YLKQEAETGKPVTMKKVFGAYSMDVITSTSFGVNVDSL-NNPKDPFV--------EKTKKLLRFDFFDPLFLSVVLFPFLTPIYEMLNICMFPKDSIEFFKKFVYRMKETRLDSVQKHRVDFLQLMMNAHNDSKDKESHTALSDMEITAQSIIFIFAGYEPTSSTLSFVLHSLATHPDTQKKLQEEIDRALPNKAPPTYDTVMEMEYLDMVLNETLRLYPIGNRLERVCKKDVEINGVF-MPKGSVVMIPSYALHRDPQHWPEP-EEFRPERFSKENKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSFQPCKETQIPLKLSRQGLLQPTKPIILKVVPRDEIITGS |
| 4HGG Chain:A ((79-434)) | ---------------------------------------------------------------------------------------------------------RDFAGDGL---ATSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRL----TLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDERM--------------------------------QFQED-IKVMNDLVDKIIADRKASGEQSD-DLLAHMLNG----KDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV-PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIK--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HGG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134084 for 2468 contacts (-54.3/contact) +
2D Compatibility (PS) -34956 + (NN) -20408 + (LL) 12552
1D Compatibility (HY) -20800 + (ID) 5600
Total energy: -203296.0 ( -82.37 by residue)
QMean score : 0.287
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