Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLIPNLAVETWLLLAVSLVLLYLYGTRTHGLFKRLGIPGPTPLPLLGNVLSYRQGLWKFDTECYKKYGKMWGTYEGQLPVLAITDPDVIRTVLVKECYSVFTNRRSLGPVGFMKSAISLAEDEEWKRIRSLLSPTFTSGKLKEMFPIIAQYGDVLVRNLRREAEKGKPVTLKDIFGAYSMDVITGTSFGVNIDSLNNPQ-DPFVESTKKFLKFGFLDPLFLSIILFPFLTPVFEALNVSLFPKDTINFLSKSVNRMKKSRLNDKQKHRLDFLQLMIDSQNSKETESHKALSDLELAAQSIIFIFAGYETTSSVLSFTLYELATHPDVQQKLQKEIDAVLPNKAPPTYDAVVQMEYLDMVVNETLRLFPVAIRLERTCKKDVEINGVF-IPKGS--MVVIPTYALHHDPKYWTEP-EEFRPERFSKKKDSIDPYIYTPFGTGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLDTQGLLQPEKPIVLKVDSRDGTLSGE |
| 4DUE Chain:A ((89-456)) | ----------------------------------------------------------------------------------------------------------------------SWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRAL-----DEAMNKLQRA--DDPAYDE-NKRQFQED-IKVMNDLVDKIIADRKASGEQSD-DLLTHML---NGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV-PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ--LHRDKTIWGDDVEEFRPERF-ENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIK-ETQ-LLKPEG-FVVKAKSKKIPLG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DUE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164510 for 2797 contacts (-58.8/contact) +
2D Compatibility (PS) -38345 + (NN) -19137 + (LL) 8644
1D Compatibility (HY) -25200 + (ID) 5950
Total energy: -244498.0 ( -87.41 by residue)
QMean score : 0.317
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