Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLERPPALAMPMPTEGTPPPLSGTPIPVPAYFRHAEPGFSLKRPRGLSRSLPPPPPAKGSIPISRLFPPRTPGWHQLQPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRS---KEDGRLYAVK--RSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTE-LCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE---GDPRYMAPELLQGS-YGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTA--GLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQPRAWGVLWCMAAEALSRGWALWQALLALLCWLWHGLAHPASWLQPLGPPATPPGSPPCSLLLDSSLSSNWDDDSLGPSLSPEAVLARTVGSTSTPRSRCTPRDALDLSDINSEPPRGSFPSFEPRNLLSLFEDTLDPT |
| 3A62 Chain:A ((13-266)) | --------------------------------------------------------------------------------------------------KIRPECF-----ELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLK--------------KAERNILEEV-KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLC------------HTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAP-PFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGA----------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A62.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93859 for 1641 contacts (-57.2/contact) +
2D Compatibility (PS) -23861 + (NN) -18208 + (LL) 10696
1D Compatibility (HY) -16800 + (ID) 4100
Total energy: -146132.0 ( -89.05 by residue)
QMean score : 0.190
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