Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKP
2FJU Chain:A ((1-136))
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTP
General information:
TITO was launched using:
RESULT:
Template:
2FJU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62417 for 973 contacts (-64.1/contact) +
2D Compatibility (PS) -14925 + (NN) -10079 + (LL) 0
1D Compatibility (HY) -20000 + (ID) 5150
Total energy: -112571.0 ( -115.69 by residue)
QMean score : 0.469
(partial model without unconserved sides chains):
PDB file :
Tito_2FJU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FJU-query.scw
PDB file :
Tito_Scwrl_2FJU.pdb
: