Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLPTRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQYRMKKLNSSDDGTQGCMGLPCVVM
4M1Y Chain:C ((2-168))MTEYKLVVVGACGVGKSALTIQLIQNHFV---------SYRKQVVIDGETSLLDILDTAG-------RDQYMRTGEGFLLVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKSDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVREIRKHK----------------------


General information:
TITO was launched using:
RESULT:

Template: 4M1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111179 for 1258 contacts (-88.4/contact) +
2D Compatibility (PS) -16907 + (NN) -8262 + (LL) 1760
1D Compatibility (HY) -19200 + (ID) 6700
Total energy: -160488.0 ( -127.57 by residue)
QMean score : 0.554

(partial model without unconserved sides chains):
PDB file : Tito_4M1Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M1Y-query.scw
PDB file : Tito_Scwrl_4M1Y.pdb: