Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKFNKPLLALLIGSTLCSAAQAAAPGKPTIAW---GNTKFAIVEVDQAATA-YNNLVKVKNAADVSVSWNLWNGDAGTTAKILLNGKEAWSGPSTGSSGTANFKVNKGGRYQMQVALCNADGCTASDATEIVVADTDGSHLAPLKEPLLEKNKPYKQNSGKVVGSYFVEWGVYGRNFTVDKIPAQNLTHLLYGFIPICGGNGINDSLKEIEG-SFQALQRSCQGREDFKVSIHDPFAALQKA--QKGVTAWDDPYKGNFGQLMALKQAHPDLKILPSIGGWTLSDPFFFMGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWEFPGGKGANPNLGSP-QDGETYVLLMKELRAMLDQLSAETGRKYELTSAISAGKDKIDKVAYNVAQNSMDHIFLMSYDFYGPFDLKNLGHQTAL------------------NAPAWKPDTAYTTVNGVNALLAQGVKPGKVVVGTAMYGRGWTGVNG---YQNNIPFTGTATGPVKGT-----WKNGIVDYRQIAGQFMSGE-------WQYTYDATAEAPYVFKPSTGDLITFDDARSVQAKGKYVLDKQLGGLFSWEIDADNGDILNSMNASLGNSAGVQ |
| 3ARP Chain:A ((1-566)) | ------------------------APTAPSIDMYGSNNLQFSKIELAMETTSGYNDMVKYHELAKIKVKFNQWSGTSGDTYNVYFDGVKVATGAITGSQTTASFEYGQGGLYQMEIEACDATGCSKSAPVEITIADTDGSHLKPLTMNVDPNNKSYNTDPSIVMGTYFVEWGIYGRDYTVDNMPVDNLTHILYGFIPIC---GPNESVKSVGGNSFNALQTACRGVNDYEVVIHDPWAAYQKSFPQAG-HEYSTPIKGNYAMLMALKQRNPDLKIIPSIGGWTLSDPFYDFVDKKNRDTFVASVKKFLKTWKFYDGVDIDWEFPGGGGAAADKGDPVNDGPAYIALMRELRVMLDELEAETGRTYELTSAIGVGYDKIEDVDYADAVQYMDYIFAMTYDFYGGWN-NVPGHQTALYCGSFMRPGQCDGGGVDENGEPYK-GPAYTADNGIQLLLAQGVPANKLVLGTAMYGRGWEGVTPDTLTDPNDPMTGTATGKLKGSTAQGVWEDGVIDYKGIK-SFMLGANNTGINGFEYGYDAQAEAPWVWNRSTGELITFDDHRSVLAKGNYAKSLGLAGLFSWEIDADNGDILNAMHEGM------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ARP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178826 for 4573 contacts (-39.1/contact) +
2D Compatibility (PS) -56760 + (NN) -31241 + (LL) 1788
1D Compatibility (HY) -52400 + (ID) 14750
Total energy: -332189.0 ( -72.64 by residue)
QMean score : 0.714
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