Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADPRPDPDELARRAAQVIADRTGIGEHDVAVVLGSGWLPAVAALGSPTTVLPQAELPGFVPPTAAGHAGELLSVPIGAHRVLVLAGRIHAYEGHDLRYVVHPVRAARAAGAQIMVLTNAAGGLRADLQVGQPVLISDHLNLT---ARSPLVGGE-------FVDLTDAYSPRLRELARQS------DPQLAEGVYAGLPGPHYETPAEIRMLQTLGADLVGMSTVHETIAARAAGAEVLGVSLVTN--LAAGITGEPLSHAEVLAAGAASATRMGALLADVIARF |
| 1V48 Chain:A ((6-280)) | -------TYEDYQDTAKWLLSHTE-QRPQVAVICGSGLGGLVNKLTQ-AQTFDYSEIPNFPES------GRLVFGILNGRACVMMQGRFHMYEGYPFWKVTFPVRVFRLLGVETLVVTNAAGGLNPNFEVGDIMLIRDHINLPGFSGENPLRGPNEERFGVRFPAMSDAYDRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVIVARHCGLRVFGFSLITNKVIMDYE----------------AAQKLEQFVSLLMA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170453 for 1941 contacts (-87.8/contact) +
2D Compatibility (PS) -25684 + (NN) -7698 + (LL) 1728
1D Compatibility (HY) -19600 + (ID) 4450
Total energy: -226157.0 ( -116.52 by residue)
QMean score : 0.590
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