Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATVEPETTPTPNPPPAEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV
2W97 Chain:B ((30-217))
-----------------------------NPEHYIKHPLQNRWALWFFKK--------NLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATK---TTKNRFVV
General information:
TITO was launched using:
RESULT:
Template:
2W97.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84407 for 1341 contacts (-62.9/contact) +
2D Compatibility (PS) -18977 + (NN) -11552 + (LL) 1436
1D Compatibility (HY) -26000 + (ID) 8750
Total energy: -148250.0 ( -110.55 by residue)
QMean score : 0.630
(partial model without unconserved sides chains):
PDB file :
Tito_2W97.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W97-query.scw
PDB file :
Tito_Scwrl_2W97.pdb
: