Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVSTASTEMSVRKIAAHMKSNPNAKVIFMVGAGISTSCGIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDPLPFYTLAKELYPGNFRPSKFHYLLKLFQDKDVLKRVYTQNIDTLERQAGVKDDLIIEAHGSFAHCHCIGCGKVYPPQVFKSKLAEHPIKDFVKCDVCGELVKPAIVFFGEDLPDSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAVYPFASLPEEIPRKVKRVLCNLETVGDFKANKRPTDLIVHQYSDEF--AEQLVEELGWQEDFEKILTAQGGMGDNSKEQLLEIVHDLENLSLDQSEHESADKKDKKLQRLNGHDSDEDGASNSSSSQKAAKE |
| 4C78 Chain:A ((7-279)) | --------KLSLQDVAELIRARACQRVVVMVGAGISTPSGIPDFRS------------DLPYPEAIFELPFFFHNPKPFFTLAKELYPGNYKPNVTHYFLRLLHDKGLLLRLYTQNIDGLERVSGIPASKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRVP---RCPVCTGVVKPDIVFFGEPLPQRF--------------LLHVVDFPMADLLLILGTSLEVEPFASLTEAVRSSVPRLLINRDLVGPLAWHPRSRD--VAQLGDVVHGVESLVELLGWTEEMRDLVQRETGKL----------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127576 for 2123 contacts (-60.1/contact) +
2D Compatibility (PS) -28134 + (NN) -18950 + (LL) 5108
1D Compatibility (HY) -29200 + (ID) 5800
Total energy: -204552.0 ( -96.35 by residue)
QMean score : 0.350
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