Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALEQNQSTDYYYEENEMNGTYDYSQYELICIKEDVREFAKVFLPVFLTIVFVIGLAGNSMVVAIYAYYKKQRTKTDVYILNLAVADLLLLFTLPFWAVN-AVHGWVLGKIMCKITSALYTLNFVSGMQFLACISIDRYVAVT--------KVPSQSGVGKPCWIICFCVWMAAILLSIPQLVFYTV--NDNA-RCIPIFPR---YLGTSMKALIQMLEICI---GFVVPFLIMGVCYFITARTLM--------KMPNIKISRPLKVLLTVVIVFIVTQLPYNIVKFCRAIDIIYSLITSCNMSKRMDIAIQVTESIALFHSCLNPILYVFMGASFKNYVMKVAKKYGSWRRQRQSVEEFPFDSEGPTEPTSTFSI |
| 4RWD Chain:A ((130-406)) | ------------------------------------------------SAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAK------LINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSPSWYWDTVTK-------ICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFV------IVWTLVDIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -232467 for 1886 contacts (-123.3/contact) +
2D Compatibility (PS) -25555 + (NN) -715 + (LL) 7128
1D Compatibility (HY) -25200 + (ID) 4100
Total energy: -280909.0 ( -148.94 by residue)
QMean score : 0.201
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