Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDSFNYTTPDYGHYDDKDTLDLNTPVDKTSNTLRVPDILALVIFAVVFLVGVLG---NALVVWVTAFEAK-RTINAIWFLNLAVADFLSCLA--LPILFTSIVQHHHWPFGGAACSILPSLILLNMYASILLLATISADRFLLVFKPIWCQNFR-GAGLAWIACAVAWGLALLLTIPSFLYRVVREEYFPP--KVLCGVDY--SHDKRRERAVAIVRLVLGFLWPLLTLTICY---TFILLRTWSRRATRST------KTLKVVVAVVASFFIFWLPYQVTGIMMSFLEPS--SPTFLLLKKLDSLCVSFAYINCCINPIIYVVAGQGFQGRLRKSLPSLLRNVLTEESVVRESKSFTRSTVDTMAQKTQAV |
| 4BEY Chain:A ((45-327)) | --------------------------------------------AYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGDFTTTLYTSL--HGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPM--SNFRFGENHAIMGVAFTWVMALACAAPPL---VGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSCFGPIFMTIPAF------FAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BEY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -274103 for 1939 contacts (-141.4/contact) +
2D Compatibility (PS) -26412 + (NN) -7551 + (LL) 5604
1D Compatibility (HY) -4800 + (ID) 800
Total energy: -308062.0 ( -158.88 by residue)
QMean score : 0.206
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