Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEECWVTEIANGSKDGLDSNPMKDYMILSGPQKTAVAVLCTLLGLLSALENVAVLYLILSSHQLRRKPSYLFIGSLAGADFLASVVFACSFVNFHVFHGVDSKAVFLLKIGSVTMTFTAS-VGSLLLTAIDRYLCLRYPPSYKALLTRGRALVTLGIMWVLSALVSYLPLMGWTCCPRP------CSE-----LFP-LIPNDYLLSWLLFIAFLFSGIIY--TYGHVLWKAHQHVASLSGHQDRQVPG---MARMRLDVRLAKTLGLVLAVLLICWFPVLALMAHSLATTLSDQVKKAFAFCSM-LCLINSMVNPVIYALRSGEIRSSAHHCLAHWKKCVRGLGSEAKEEAPRSSVTETEADGKITPWPDSRDLDLSDC |
| 4UHR Chain:A ((16-298)) | ------------------------------------------IAVLAILGNVLVCWAVWLNSNLQNVTNY-FVVSAAAADILVGVL-AIPFA-IAISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKAGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQM---ESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC-HAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPFKAAAA------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -247513 for 2006 contacts (-123.4/contact) +
2D Compatibility (PS) -27106 + (NN) -18025 + (LL) 4616
1D Compatibility (HY) -30800 + (ID) 3900
Total energy: -322728.0 ( -160.88 by residue)
QMean score : 0.367
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