Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEHDYHEDYGFSSFNDSSQEEHQDFLQFSKVFLPCMYLVVFVCGLVGNSLVLVISIFYHKLQSL---TDVFL-VNLPLADLVFVCTLPFWAYAGI---HEWVFGQVMCKSLLGIYTINFYTSMLILTCITVDRFIVVVKATKAYNQQAKRMTWGKVTSLLIWVISLLVSLP-------QIIYGNVFNLDKLIC-GYHDEAISTVVLATQMTLGFFLPLLTMIVCYSVIIKTL---LHAGGFQK-------HRSLKIIFLVMAVFLLTQMPFNLMK----FIRSTHWEYYAMTSFHYTIMVTEAIAYLRACLNPVLYAFVSLKFRKNFWKLVKDIGCLPYLGVSHQWKSSEDNSKTFSASHNVEATSMFQL |
| 4BUO Chain:A ((16-320)) | ----------------------------YSKVLVTAIYLALFVVGTVGNSVTLFTLARKK---SLQSTVDYYLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGCRGYYFLRDACTYATALNVVSLSVELYLAICHPFKAKTLMSRSRTKKFISA--IWLASALLAIPMLFTMGLQNLSGDGTHPGGLVCTPIVDTATLKVVIQVNTFMSFLFPMLVASILNTVIANKLTVMVHQ-----PGRVQALRRGVLVLRAVVIAFVVCWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALVYVSAAINPILYNLVSANFRQVF---LSTL------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BUO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -247300 for 1898 contacts (-130.3/contact) +
2D Compatibility (PS) -26769 + (NN) -4069 + (LL) 4256
1D Compatibility (HY) -23600 + (ID) 3700
Total energy: -301182.0 ( -158.68 by residue)
QMean score : 0.206
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