Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMETNSSLPTNISGGTPAVSAGYLFLDIITYLVFAVTFVLGVLGNGLVIWV-AGFRMTHTVTTISYLNLAVADFCFTSTLPFFMVRKAMGGHWPFGWFLCKFVFTIVDINLFGSVFLIALIALDRCVCVLHPVWTQNHRTVSLAKKVIIGPWVMALLLTLP-VIIRVTTVPGKTGTVACTFNFSP---WTNDPKERINV-------AVAMLTVRGIIRFIIGFSA------------------------------PMSIVAVSYGLIATKIHK-QGLIKSSRPLRVLSFVAAAFFLCWSPYQVVALIATVRIRELLQGM--YKEIGIAVDVTSALAFFNSCLNPMLYVFMGQDFRERLIHALPASLERALTEDSTQTSDTATNSTLPSAEVELQAK
4MBS Chain:A ((38-362))-------------------------------LYSLVFIFGFVGNMLVILILINYKRLKSMTDIYLLNLAISDLFFLLTVPFWAHYAA--AQWDFGNTMCQLLTGLYFIGFFSGIFFIILLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPNIIFTRSQKEGLHYTCSSHFPYSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVGKDQFEEVEEEKKRHRDVRLIFTIMIVYFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQVTETLGMTHCCINPIIYAFVGEEFRNYLLVFFQ---------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4MBS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -235009 for 1966 contacts (-119.5/contact) +
2D Compatibility (PS) -28628 + (NN) -4010 + (LL) 3480
1D Compatibility (HY) -35200 + (ID) 4000
Total energy: -303367.0 ( -154.31 by residue)
QMean score : 0.281

(partial model without unconserved sides chains):
PDB file : Tito_4MBS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MBS-query.scw
PDB file : Tito_Scwrl_4MBS.pdb: