Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSTCTNSTRESNSSHTCMPLSKMPISLAHGIIRSTVLVIFLAASFVGNIVLALVLQRKPQLLQVTNRFIFNLLVTDLLQISLVAPWVVATSVPLFWPLNSHFCTALVSLTHLFAFASVNTIVVVSVDRYLSIIHPLS--YPSKMTQRRGYLLLYGTWIVAILQSTPPLYGWGQAAFDERNALCSMIWGASPSYTILSVVSF------IVIPLIVMIACYSVVFCAARRQHALLYNVKRHSLEVRVKDCVENEDEEGAEKKEEFQDESEFRRQHEGEVKAKEGRMEAKDGSLKAKEGSTGTSESSVEARGSEEVRESSTVASDGSMEG--KEGSTKVEENSMKADKGRTEVNQCSIDLGEDDMEFGEDDINFSED---DVEAVNIPESL----PPSR--------RNSNSNPPLPRCYQC-KAAKVIFIIIFSYV---------LSLGPYCFLAVLAVWVDVETQVPQWVITIIIWLFFLQCCIHPYVYGYMHKTIKKEIQDMLKKFFCKEKPPKEDSHPDLPGTEGGTEGKIVPSYDSATFP |
| 3OE8 Chain:A ((49-479)) | -------------------------------IFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVAN--WYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEK--VVYVGVWIPALLLTIPDFIFANVSEADDR-YICDRFY---PNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSNIFEMLRIDEGLRLK---------------IYKDTEGYYTIGIGHLLTKSPSLNAAKSEL---DKAIGRNTNGVITKDEAEKLFNQDV--DAAVRGILRNAKLKPVYDSLDAVRRAALINMV-FQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAY----HQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKW-ISITEALAFFHCCLNPILYAFL--------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3OE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -136415 for 2778 contacts (-49.1/contact) +
2D Compatibility (PS) -39232 + (NN) 564 + (LL) 4468
1D Compatibility (HY) -37200 + (ID) 4750
Total energy: -212565.0 ( -76.52 by residue)
QMean score : 0.130
|
|
|