Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLAAAFADSNSSSMNVSFAHLHFAGGYLPSDSQDWRTIIPALLVAVCLVGFVGNLCVIGILLHNAWKGKPSMIHSLILNLSLADLSLLLFSAPIRATAYSKSVWDLGWFVCKSSDWFIHTCMAAKSLTIVVVAKVCFMYASDPAKQVSIHNYTIWSVLVA-IWTVASLLPLPEWFFSTIRHHEGVEMCLVDVPAVAEEFMSM-FGKLYPLLAFGLPLFFASFYFWRAYDQCKK-RGTKTQNLRNQIRSKQVTVMLLSIAI-ISALLWLPEWVAWLWVWHLKAAGPAPPQGFIALSQVLMFSISSANPLIFLVMSEEFREGLKGVWKWMITKKPPTVSESQETPAGNSEGLPDKVPSPESPASIPEKEKPSSPSSGKGKTEKAEIPILPDVEQFWHERDTVPSVQDNDPIPWEHEDQETGEGVK |
| 3ZPQ Chain:A ((7-296)) | -------------------------------SQQWEAGMSLLMALVVLLIVAGNVLVIAAI--GSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ-------SRVMLMREHKALKTLGIIMGVFTLCWLPFFL--VNIVNVFNRDLVPDWLFVAFNW-LGYANSAMNPIIY-CRSPDFRKAFKRLLA------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221827 for 2057 contacts (-107.8/contact) +
2D Compatibility (PS) -28306 + (NN) -11214 + (LL) 5408
1D Compatibility (HY) -24000 + (ID) 3050
Total energy: -282989.0 ( -137.57 by residue)
QMean score : 0.280
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