Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDVTSQARGVGLEMYPGTAQPAAPNTTSPELNLSHPLLGTALANGTGELSEHQQYVIGL--------FLSCLYTIFLFPIGFVGNILILVVNISFREKMTIPDLYFINLAVADL--ILVADSLI-EVFNLHERYYDIAVLCTFMSLFLQVNMYSSVFFLTWMSFDRYIALARAMRCSLFRTKHHARLSCG-LIWMASVSA-TLVPFTAVHLQHTDEACFCFADVREVQWLE---------VTLGFIVPFAIIGLCYSLIVRVLVRAHRH------------------RGLRPR-----------------------------RQKALRMILAVVLVFFVCWLPENVFISVHLLQRTQPGAAPCKQSFRHAHPLTGHIVNLAAFSNSCLNPLIYSFLGETFRDKLRLYIEQKTNLPALNRFCHAALKAVIPDSTEQSDVRFSSAV |
| 4XNW Chain:A ((37-382)) | ----------------------------------------------------SSFKCALTKTGFQFYYLPAVY-ILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDA-MCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPLK-SLGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRKNKTITCY-DTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLD-FQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -244506 for 2009 contacts (-121.7/contact) +
2D Compatibility (PS) -28108 + (NN) -7514 + (LL) 5604
1D Compatibility (HY) -28800 + (ID) 4100
Total energy: -307424.0 ( -153.02 by residue)
QMean score : 0.254
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