Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNASAASLNDSQVVVVAAEGAAAAATAAGGPDTGEWGPPAAAALGAGGGANGSLELSSQLSAGPPGLLLPAVNPWDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGC-----GLILHFVFQYLVPSETVSLLTVGFLVASFAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVL--GW--------NCLAERAACSVVRPLARSHVALLSAAFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSHEDPAV--YTYATLLPATY-NSMINPIIYAFRNQEIQRALWLLLCGCFQSKVPFRSRSPSEV |
| 2Y03 Chain:A ((3-299)) | ----------------------------------------------------AELLSQQWEAGM-SLLMALV----VLLIVAG------NVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWT-SLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYA-IASSIISFYIPLLIMIFVALRVYREAKEQIR---------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA----------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Y03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -243613 for 1937 contacts (-125.8/contact) +
2D Compatibility (PS) -27385 + (NN) -9416 + (LL) 4156
1D Compatibility (HY) -28400 + (ID) 4250
Total energy: -308908.0 ( -159.48 by residue)
QMean score : 0.272
|
|
|