Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGPGEALLAGLLVMVLAVALLSNALVLLCCAYSAELRTRASGVLLVNLSLGHLLLAALDMPFTLLGVMRGRTPSAPGACQVIGFLDTFLASNAALSVAALSADQWLAVGFPLRYAGRLRPRYAGLLLGCAWGQSLAFSGAALGCSW---LGYSSAF-ASCSLRLPPEPERPRFAAFTATLHAVGFVLPLAVLCLTSLQVHRVARRHCQRMDTVTMKALALLADLHPSVRQRCLIQQKR--RRHRATRKIGIAIATFLICFAPY-VMTRLAELVPFVTVNAQWGILSKCLTYSKAVADPFTYSLLRRPFRQVLAGMVHRLLKRTPRPASTHDSSLDVAGMVHQLLKRTPRPASTHNGSVDTENDSCLQQTH |
| 4MQT Chain:A ((44-326)) | -----VLVAGSLSLV---TIIGNILVMVSIKVNRHLQT-VNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAI-LFWQFIVGVRTVEDGECYIQFFSN------AAVTFGTAIAAFYLPVIIMTVLYWHISRASK----------------------------------PSREKKVTRTILAILLAFIITWAPYNVMVLINTFCAPCIPNTVWTI-GYWLCYINSTINPACYALCNATFKKTFKHLLMC---------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4MQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -178332 for 1890 contacts (-94.4/contact) +
2D Compatibility (PS) -26284 + (NN) -15567 + (LL) 6700
1D Compatibility (HY) -27600 + (ID) 3150
Total energy: -244233.0 ( -129.22 by residue)
QMean score : 0.265
|
|
|