Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MERAPPDGPLNASGALAGEAAAAGGARGFSAAWTAVLAALMALLIVATVLGNALVMLAFVADSSLRTQNNFFLLNLAISDFLVGAFCIPLYVPYVL-TGRWTFGRGLCKLWLVVDYLLCTSSAFNIVLISYDRFLSVTRAVSYRAQQGDTR-RAVRKMLLVWVLAFLLYGPA-ILSWEYLSGGSSIPEGHCYAEFFYNWYFLITASTLEFFTPF--LSVTFFNLSIY---------------LNIQRRTRLRLDGAREA-------------AGPEPPPEAQPSPPPPPGCWGCWQKGHGEAMPLHRYGVGEAAVGAEAGEATLGGGGGGGSVASPTSSSGSSSRGTERPRSLKRGSKPSASSASLEKRMKMVSQSFTQRF--RLSRDRKVAKSLAVIVSIFGLCWAPYTLLMIIRAACH--GHCVPDYWYETSFWLLWANSAVNPVLYPLCHHSFRRAFTKLLCPQKLKIQPHSSLEHCWK |
4IB4 Chain:A ((33-407)) | -------------------------------------ALLILMVIIPTIGGNTLVILAVSLEKKLQYATNYFLMSLAVADLLVGLFVMPIALLTIMFEAMWPLPLVLCPAWLFLDVLFSTASIWHLCAISVDRYIAIKKPI--QANQYNSRATAFIKITVVWLISIGIAIPVPIKGIET---NPNNITCVLTKERFGD--FMLFGSLAAFFTPLAIMIVTYF-LTIHALQKKAADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQK----------------------------KDFRHGF-DILVGQIDDALKLANEG-----------------------------KVKEAQAAAE-QLKTTRNAYIQKYLQTISNEQRASKVLGIVFFLFLLMWCPFFITNITLVLCDSCNQTTLQMLLEIFVWIGYVSSGVNPLVYTLFNKTFRDAFGRYITCNYR------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IB4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218978 for 2276 contacts (-96.2/contact) +
2D Compatibility (PS) -32573 + (NN) -7684 + (LL) 2028
1D Compatibility (HY) -30800 + (ID) 4750
Total energy: -292757.0 ( -128.63 by residue)
QMean score : 0.231
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