Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNECHYDKHMDFFYNRSNTDTVDDWTGTKLVIVLCVGTFFCLFIFFSNSLVIAAVIKNRKFHFPFYYLLANLAAADFFAGIAYVFLMFNTGPV-SKTLTV-NRWFLRQGLLDS-SLTASLTNLLVIAVERHMSIMR-MRVHSNLTKKRVTLLILLVWAIAIFMGAVP-TLGW---------NCLCNISACSSLAPIYSRSYLVFWT-VSNLMAFLIMVVVYLRIYVYVKRKTNVLSPHTSGSISRRRTPMKLMKTVMTVLGAFVVCWTPGLVVLLLDGLNCRQCGVQHVKRWFLL--LALLNSVVNPIIYSYKDEDMYGTMKKMICCFSQENPERRPSRIPSTVLSRSDTGSQYIEDSISQGAVCNKSTS |
| 4LDO Chain:A ((188-462)) | -----------------------------------VMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVV--PFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFT---NQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQ---KFA-------LKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVI---QDNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4LDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -215284 for 1852 contacts (-116.2/contact) +
2D Compatibility (PS) -26131 + (NN) -13073 + (LL) 4808
1D Compatibility (HY) -29200 + (ID) 3950
Total energy: -282830.0 ( -152.72 by residue)
QMean score : 0.348
|
|
|