Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNPFHASCWNTSAELLNKSWNKEFAYQTASVVDTVILPSMIGIICSTGLVGNILIVFTIIRSRK-KTVPDIYICNLAVADLVHIVGMPFLIHQWARGGEWVFGGPLCTIITSLDTCNQFACSAIMTVMSVDRYFALVQPFRLTRWRTRYKTIRINLGLWAASFILALPVWVYSKVIKFKDGVE--SCAFDLTSPDDVLWYTLYLTITTFFFPLPLILVCYILILCYTWEMYQQNKDARCCNPSVPKQRVMKLTKMVLVLVVVFILSAAPYHVIQLVNLQMEQ--PTLAFYVGYYLSICLSYASSSINPFLYILLSGNFQKRLPQIQRRATEKEINNMGNTLKSHF |
| 4MQT Chain:A ((48-331)) | -----------------------------------------GSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYIQFFSNAAV---TFGTAIAAFYLPVIIMTVLYWHISRASK-----------------PSREKKVTRTILAILLAFIITWAPYNVMVLINTFCAPCIPNTVWTIGYW----LCYINSTINPACYALCNATFKKTFKHLLMC----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233830 for 1919 contacts (-121.8/contact) +
2D Compatibility (PS) -25479 + (NN) 905 + (LL) 5692
1D Compatibility (HY) -23600 + (ID) 3750
Total energy: -280062.0 ( -145.94 by residue)
QMean score : 0.309
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