Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGTCDIVTEANISSGPESNTTGI--TAFSMPS------WQLALWATAYLALVLVAVTGNAIVIWIILAHRRMRTVTNYFIVNLALADLCMAAFNAAFNFVYAS-HNIWYFGRAFCYFQNLFPITAMFVSIYSMTAIAADRYMAIVHPFQP-RLSAPSTKAVIAGIWLVALALASPQCFYSTVTMDQGAT-KCVVAW---PEDSGGKTLLLYHLVVIALIYFLPLAVMFVAYSVIGLTLWRRAVPGHQAHGANLRHLQAMKKFVKTMVLVVLTFAICWLPY-HLYFILGSFQEDIYCHKFIQQVYLALFWLAMSSTMYNPIIYCCLNHRFRSGFRLAFRCCPWVTPTKEDKLELTPTTSLSTRVNRCHTKETLFMAGDTAPSEATSGEAGRPQDGSGLWFGYGLLAPTKTHVEI |
1HZX Chain:A ((15-346)) | ---------------PFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFM-VFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFII---PLIVIFFCYGQLVFTVKEAA--A-----ATTQ--KAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMT---IPAFF-AKTSAVYNPVIYIMMNKQFRNCMVTTL-CC-GKNPLGD---STTVSKTETSQVAPA----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HZX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -269634 for 2442 contacts (-110.4/contact) +
2D Compatibility (PS) -31432 + (NN) -4839 + (LL) 3976
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -306329.0 ( -125.44 by residue)
QMean score : 0.268
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