Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGPIGAEADENQTVEEMKVEQYGPQTTPRGELVPDPEPELIDSTKLIEVQVVLILAYCSIILLGVIGNSLVIHVVIKFKSMRTVTNFFIANLAVADLLVNTLCLPFTLTYTLMGEWKMGPVLCHLVPYAQGLAVQVSTITLTVIALDRHRCIV--YHLESKISKRISFLIIGLAWGISALLASPLAIFREYSLIEIIPDFEIVACTEKWPGEEKSIYGTVYSLSSLLILYVLPLGIISFSYTRIWSKLKNHV-SPGAANDHYHQRRQKTTKMLVCVVVVFAVSWLPLHAFQLAVDIDSQVLDLKEYKLIFTVFHIIAMCSTFANPLLYGWMNSNYRKAF--LSAFRCEQRLDAIHSEVSVTFKAKKNLEVRKNSGPNDSFTEATNV |
| 4BVN Chain:A ((21-300)) | -----------------------------------------------------------VVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASVETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALV-SFLPIMMHWWRDE---DPQALKCYQD-PGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR-KRKTSRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVP----KWLFVAFNWLGYANSAMNPIILC-RSPDFRKAFKRLLA------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -202616 for 2054 contacts (-98.6/contact) +
2D Compatibility (PS) -26999 + (NN) -3198 + (LL) 7632
1D Compatibility (HY) -26800 + (ID) 4250
Total energy: -256231.0 ( -124.75 by residue)
QMean score : 0.273
|
|
|