Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEIVSTGNETITEFVLLGFYDIPELHFLFFIVFTAVYVFIIIGNMLIIVAVVSSQRLHKPMYIFLANLSFLDILYTSAVMP---KMLEGFLQEATISVAGCL-LQFFIFGSLATAECLLLAVMAYDRYLAICYPLHYPLLMGPRRYMGLVVTTWLSGFVVDGLVVALVAQLRFCGPNHIDQFYCDFMLFVGLACSDPRVAQVTTLILSVF--CLTIPFGLILTSYARIVVAVLR-------VPAGASRRRAFSTCSSH----LAVVTTFYGTLMI--------FYVAPSAVHSQLLSKVFSLLYTVVTPLFNPVIYTMRNKEVHQALRKIL---CIKQTETLD |
| 2YDV Chain:A ((15-312)) | ----------------------------------AIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIAISTGFCA----ACHGCLFIACFVLVLTASSIFSLLAI-AIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAI-GLTPML--GWNNCGQPKEGKAHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQ--------STLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPFK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YDV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -273159 for 1934 contacts (-141.2/contact) +
2D Compatibility (PS) -26200 + (NN) -6888 + (LL) 4408
1D Compatibility (HY) -26000 + (ID) 3700
Total energy: -331539.0 ( -171.43 by residue)
QMean score : 0.341
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