Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNTSSSDFTLLGLLVNSEAAGIVFTVILAVFLGAVTANLVMIFLIQVDSRLHTPMYFLLSQLSIMDTLFICTTVPKLLADMVSKEKIISFVACGIQIFLYLTMIGSEFFLLGLMAYDCYVAVCNPLRYPVLMNRKKCLLLAAGAWFGGSLDGFLLTPITMNVPYCGSRSINHFFC-EIPAVLKL----ACADTSLYETLMYICCVLMLLIPISIIS----TSYSLILLTIHRMPSAEGRK---------KAFTTCSSHLTVVSIFYGAAFYTYVLPQSFHTPEQDKVVSAFYTI--VTPMLNPLIYSLRNKDVIGAFKKVFACCSSAQKVATSDA |
| 3ZPQ Chain:A ((5-300)) | -------------LLSQQWEAGMSLLMALVVLL-IVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFL--PIMM-----------HWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ-----------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ZPQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -253280 for 1943 contacts (-130.4/contact) +
2D Compatibility (PS) -26516 + (NN) -3109 + (LL) 2224
1D Compatibility (HY) -20800 + (ID) 3400
Total energy: -304881.0 ( -156.91 by residue)
QMean score : 0.286
|
|
|