Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEPRKNVTDFVLLGFTQNPKEQKVLFVMFLLFYILTMVG---NLLIVVTVTVSETLGSPMYFFLAGLSFIDII-----YSSSISPRLISGLFFGNNSISFQSCMAQLFIEHIFGGSEVFL--LLVMAYDCYVAICKPL--------HYLV-IMRQWV----CVVLLVVSWVGGFLHSVFQLSIIYGLPFCGPNVIDHFFCDMYPLLKLVCTDTHAIGLLVVANGGLACTIVFLLLLISYGVILHSLKNLSQKGR-----QKALSTCSSHMTVVVFFFVPCIFMYA---------RPARTFPIDKSVSVFYTVITPMLNPLIYTLRNSEMTSAMKKLWRRDLISSST
1LN6 Chain:A ((45-315))--------------------------------FLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATL-------GGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGW-SRYIPEGMQCS-------CG--------IDYYTPHEETNNESFVIYMFVV-----HFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVVATTLCCGKNPL


General information:
TITO was launched using:
RESULT:

Template: 1LN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -205955 for 1703 contacts (-120.9/contact) +
2D Compatibility (PS) -22035 + (NN) 16266 + (LL) 4520
1D Compatibility (HY) -27200 + (ID) 3050
Total energy: -237454.0 ( -139.43 by residue)
QMean score : 0.130

(partial model without unconserved sides chains):
PDB file : Tito_1LN6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LN6-query.scw
PDB file : Tito_Scwrl_1LN6.pdb: