Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLPSNITSTHPAVFLLVGIPGLEHLHAWISIPFCFAYTLALLGNCTLLFIIQADAALHEPMYLFLAMLATIDLVLSSTTLPKMLAIFWFRDQEINFFACLVQMFFLHSFSIM----ESAVLLAMAFDRYVAICKPLHYTTVLTGSLITKIGMAAVARAVTLMTPL-----PFLLRRFHYCRG--PVIAHCYCEHMAVVRLACGDTSFNNIYGIAVAM--FIVVLDLLFVILSYVF-----ILQAVLQLASQEARYKAFGTCVSHIGAILSTYT----PVVISSVMHRVARH-AAPRVHILLA-IFYLLFPPMVNPIIYGVKTKQIREYVLSLFQRKNM |
| 4LDO Chain:A ((197-447)) | ----------------------------------------VFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCE----FWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKN---------KARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEE------TCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQ---KFALKE--HKALKT----LGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYV--NSGFNPLIYCRSPDFRIAFQELLCL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188804 for 1502 contacts (-125.7/contact) +
2D Compatibility (PS) -22476 + (NN) -6447 + (LL) 7216
1D Compatibility (HY) -23600 + (ID) 3700
Total energy: -237811.0 ( -158.33 by residue)
QMean score : 0.259
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