Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDGDNQSENSQFLLLGISESPEQQRILFWMFLSMYLVTVLGNVLIILAISSDSHLHTPMYFFLANLSFTDLFFVTNTIPKMLVNFQSQ---NKAISYAGCLTQLYFLVSL--VTLDNLILAVMAYDRYVATCCPLHYVTAMSPGLCVLLLSLCWGLSVLYGLLLTFLLTRVTFCGPREIHYLFCDMYILLWLACSNTHIIHTALIATGCFIFLTPLGFMTTSYVRIVRT----ILQMPSASKK--------YKTFSTCASHLGVVSLFYGTLAMVYLQPLHTYSMKDSVATVMYAVL---TPMMNPFIYRLRNKDMHGAPGRVLWRPFQRPK |
2YCZ Chain:A ((23-297)) | -----------------------------------LLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADL-----VVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISA----LVSFLPIMMHWWRDEDPQALKCYQDP----GCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIY-CRSPDFRKAFKRLLAF------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -223072 for 1811 contacts (-123.2/contact) +
2D Compatibility (PS) -25043 + (NN) -1402 + (LL) 4464
1D Compatibility (HY) -23600 + (ID) 3500
Total energy: -272153.0 ( -150.28 by residue)
QMean score : 0.186
|
|
|