Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSDNHSFLGDSPKAFILLGVSDRPWLELPLFVVLLLSYVLAMLGNVAIILASRVDPQLHSPMYIFLSHLSFLDLCYTTTTVP--QMLVNMGSSQKTISYGGCTVQ-YAVFHWLGCTECI-VLAAMALDRYVAICKPLHYAVLMHRALCQQLVALAWLSGFGNSFVQVVLTVQLPFCGRQVLNNFFCEVPAVIKL----SCADTAVND--TILAVLVAFFV--LVPLALILLSYGFIARAVLRIQSSKGR--------HKAFGTCSSHLMIVSLFYLPAIYMYLQPPSSYSQE---QGKFISLFY-SIITPTLNPFTYTLRNKDMKGALRRLLARIWRLCG |
| 2Y01 Chain:A ((11-300)) | ---------------------------EAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRG----TWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPI------------MMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ----------SRVMLMREHKALKTLGIIMGVFTLCWLP--FFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Y01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -217547 for 1823 contacts (-119.3/contact) +
2D Compatibility (PS) -25799 + (NN) -9691 + (LL) 4104
1D Compatibility (HY) -23600 + (ID) 3400
Total energy: -275933.0 ( -151.36 by residue)
QMean score : 0.270
|
|
|