Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKANETSPVMGFVLLRLSAHPELEKTFFVLILLMYLVILLGNGVLILVTILDSRLHTPMYFFLGNLSFLDICFTTSSVPLVLDSFLTPQETISFSA--CAVQMALSFAMAGTECLLLSMMAFDRYVAICNPLRYSVIMSKAAYMPMAASSWAIGGAASVVHTSLAIQLPFCGDNVINHFTCEILAVLKLACADISINVISMEVTNVIFLGVPVLFISF----SYVFIITTILRIPSAEGRK---------KVFSTCSAHLTVVIVFYGTLFFMYGKPKSKDSMGADKEDL-SDKLIPLF--YGVVTPMLNPIIYSLRNKDVKAAVRRLLRPKGFTQ |
| 2Y03 Chain:A ((9-299)) | ----------------------QWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPF--GATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSF----LPIMMHWWRDEDPQALKC----YQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR---------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLV-------NIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -225571 for 1926 contacts (-117.1/contact) +
2D Compatibility (PS) -26560 + (NN) -5832 + (LL) 3416
1D Compatibility (HY) -24000 + (ID) 3500
Total energy: -282047.0 ( -146.44 by residue)
QMean score : 0.166
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