Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDPQNYSLVSEFVLHGLCTSRHLQNFFFIFFFGVYVAIMLG---NLLILVTVISDPCLHSSPMYFLLGNLAFLDMWLASFATPKMIRDFLSDQKLISFGGCMAQIFFLHFTGGAEMVLLVSMAYDRYVAICKPLHYMTLMSWQTCIRLVLASWVVGFVHSISQVAFT-VNLPYCGPNEVDSFFCDLPLVIKLAC-MDTYVLGIIMISDSGLLSLSC--FLLLLI---------SYTVILLAIRQRAAGSTSKALSTCSAHIMVVTLFF--------GPCIFVYVRPFSRFS-VDKLLSVFYTIFTPLLNPIIYTLRNEEMKAAMKKLQNRRVTFQ |
2G87 Chain:A ((51-318)) | -------------------------------------IMLGFPINFLTLYVTVQHKKLRT-PLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKP----------------MSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2G87.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -205430 for 1818 contacts (-113.0/contact) +
2D Compatibility (PS) -24065 + (NN) -306 + (LL) 4928
1D Compatibility (HY) 3200 + (ID) 1200
Total energy: -222873.0 ( -122.59 by residue)
QMean score : 0.139
|
|
|