Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGAKNNVTEFVLFGLFESREMQHTCFVVFFLFHVLTVLGNLLVIITINARKTLKSPMYFFLSQLSFADICYPSTTIPKMIADTFVEHKIISFNGCMTQLFSAH--FFGGTEIFLLTAMAYDRYVAICRPLHYTAIMDCRKCGLLAGASWLAGFLHSILQTLLTVQLPFCGPNEIDNFFCDVHPLLKLACADTYMVGLIVVANSGMISLASFFILIISYVIILLNLRSQSSEDRR---------------KAVSTCGSHVITVLLVLMPPMFMYIRP--STTLAADKLIILFNIV--MPPLLNPLIYTLRNNDVKNAMRKLFRVKRSLGEK |
2YCY Chain:A ((10-299)) | --------------------WEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP--FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAI----SALVSFLPIMMHWWRDEDPQALKCYQDP----GCCDFVTNRAYAIAS----SIISFYIPLLIMIFVALRVYREAKEQIRDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAF------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210513 for 1955 contacts (-107.7/contact) +
2D Compatibility (PS) -26547 + (NN) -1223 + (LL) 3220
1D Compatibility (HY) -29600 + (ID) 3250
Total energy: -267913.0 ( -137.04 by residue)
QMean score : 0.221
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