Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPENDTGISEFVLLGLSEEPELQPFLFGLFLS-MYLVTVLG---NLLIILATISDSHLHTPMYFFLSNLSFADICFISTTIPKMLINIQTQSRVITYAGCITQMCFFVLFGGLDSLLLAVMAYDRFVAICHPL-HYTVIMNPRLCGLLVLASWMIAALNSLSQSLMVLWLSF------CT---DLEIPHFFCELNQVIHLACSDTFLNDMGMYFAAGLLAGGPLVGILCSYSKIVSSIRAISSAQGKYKAFSTCASHLS------VVSLFCC----TGLGVYL-TSAATHNSHTSATASVMYTVATPMLNPFIYSLRNKDIKRALKMSFRGKQ |
| 1LN6 Chain:A ((40-315)) | ------------------------------LAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG--VAFTWVMAL--ACAAPPLVGWSRYIPEGMQCSCGIDYYTPH--EETN-------NESFVIYM---FVVHFII--PLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVVATTLCC |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184134 for 1894 contacts (-97.2/contact) +
2D Compatibility (PS) -24028 + (NN) 13902 + (LL) 3136
1D Compatibility (HY) -26400 + (ID) 3150
Total energy: -220674.0 ( -116.51 by residue)
QMean score : 0.068
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