Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWPNGSSLGPCFRPTNITLEERRLIASPWFAASFCVVGLASNLLALSVLAGARQGGSHTRSSFLTFLCGLVLTDFLGLLVTGTIVVSQHAALFEWHAVDP-GCRLCRFMGVVMIFFGLSPLLLGAAMASERYLGITRPFSRPAVASQRRAWATVGLVWAAALALGLLPLLGVGRYTVQYPGSWC-----FLTLGAESGDVAFGLLFSMLGGLSVGLSFLLNTVSVATLCH---VYHGQEAAQQRPRDSEVEM----MAQLLGIMVVAS-VCWLP-----LLVFIAQTVLRNPPAMSPAGQLSRTTEKELLIYLRVATWNQILDPWVYILFRRAVLRRLQPRLSTRPRSLSLQPQLTQRSGLQ |
| 3DQB Chain:A ((49-311)) | -----------------------------------MLGFPINFLTLYVTVQHKK----LRTPLNYILLNLAVADLF--MVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVV---LAIERYVVVCKPMSNFRFG-ENHAIMGVAFTWVMALACAAPPLVGWSRYIPE--GMQCSCGIDYYTPHEETNNESFVIYMFV-------VHFIIPLI-VIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTS--------------AVYNPVIYIMMNKQFRNCMVTTLCCGKN--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179135 for 1780 contacts (-100.6/contact) +
2D Compatibility (PS) -25554 + (NN) -12439 + (LL) 4408
1D Compatibility (HY) -26800 + (ID) 3250
Total energy: -242770.0 ( -136.39 by residue)
QMean score : 0.249
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