Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP--RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCKENLDSHLPPSQNTSELNTA
1GII Chain:A ((2-291))----------ENFQKVEKIGEGTYGVVYKARN-KLTGEVVALKKI--------VPSTAIREISLLKELN---HPNIVKLLDVIHT-----ENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF----------VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL--------------


General information:
TITO was launched using:
RESULT:

Template: 1GII.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -180815 for 2109 contacts (-85.7/contact) +
2D Compatibility (PS) -27867 + (NN) -9952 + (LL) 2796
1D Compatibility (HY) -32400 + (ID) 7100
Total energy: -255338.0 ( -121.07 by residue)
QMean score : 0.733

(partial model without unconserved sides chains):
PDB file : Tito_1GII.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GII-query.scw
PDB file : Tito_Scwrl_1GII.pdb: