Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMAGQPGHMPHGGSSNNLCHTLGPVHPPDPQRHPNTLSFRCSLADFQIEKKIGRGQFSEVYKATCLLDRKTVALKKVQIFEMMDAKARQDCVKEIGLLKQLNHPNIIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSETTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPGEHYSEKLRELVSMCICPDPHQRPDIGYVHQVAKQMHIWMSST
2JAV Chain:A ((7-262))-------------------------------------------DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAE-KQMLVSEVNLLRELKHPNIVRYYDRIID--TLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD-----LKPANVFLDGKQNVKLGDFGLARIL-----------GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA--FSQKELAGKIREGKFRRIP-YRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHHHHHH


General information:
TITO was launched using:
RESULT:

Template: 2JAV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -147968 for 1716 contacts (-86.2/contact) +
2D Compatibility (PS) -24742 + (NN) -15636 + (LL) 1436
1D Compatibility (HY) -22800 + (ID) 4550
Total energy: -214260.0 ( -124.86 by residue)
QMean score : 0.524

(partial model without unconserved sides chains):
PDB file : Tito_2JAV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JAV-query.scw
PDB file : Tito_Scwrl_2JAV.pdb: