Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPGKQSEEGPAEAGASEDSEEEGLGGLTLEELQQGQEAARALEDMMTLSAQTLVRAEVDELYEEVRPLGQGCYGRVLLVTHRQKGTPLALKQLPKPRTSLRGFLYEFCVGLSLGAHSAIVTAYGIGIESAHSYSFLTEPVLHGDLMAFIQPKVGLPQPAVHRCAAQLASALEYIHARGLVYRDLKPENVLVCDPACRRFKLTDFG-----HTRPRGTLLRLAGPPIPYTAPELCAPPPLPEGLPIQPALDAWALGVLLFCLLTGYFPWDRPLAEADPFYEDFLIWQASGQPRDRPQPWFGLAAAADALLRGLLDPHPRRRSAVIAIREHLGRPWRQREGEAEAVGAVEEEAGQ |
| 4RVL Chain:A ((7-261)) | -----------------------------------------------------------EDWDLVQTLG------VQLAVNRVTEEAVAVKIVDMK-----NIKKEICINKMLN-HENVVKFYGHRREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK----RREFHAEP-VDVWSCGIVLTAMLAGELPWDQP-SDSCQEYSD---WK---EKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGA------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141497 for 1810 contacts (-78.2/contact) +
2D Compatibility (PS) -25430 + (NN) -19727 + (LL) 5808
1D Compatibility (HY) -17200 + (ID) 3900
Total energy: -201946.0 ( -111.57 by residue)
QMean score : 0.374
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